Skip to contents

All functions

ai_long
AI-collaboration messages (long format)
as.data.frame(<transitiontrees>)
Coerce a context tree to a Tidy Data Frame
as.data.frame(<transitiontrees_bootstrap>)
Coerce a context tree Bootstrap to a Tidy Data Frame
as.data.frame(<transitiontrees_comparison>)
Coerce a context tree Comparison to a Tidy Data Frame
as.data.frame(<transitiontrees_group>)
Coerce a Group of Trees to One Tidy Data Frame
as.data.frame(<transitiontrees_group_comparison>)
Coerce a Group Comparison to a Tidy Data Frame
bootstrap_pathways()
Bootstrap Pathway Stability and Informativeness
common_pathways()
Most Common Pathways in a Fitted Tree
compare_groups()
Compare Groups of Sequences for Structural Differences
compare_pruning()
Compare Pruning Criteria on One Tree
compare_smoothing()
Compare Smoothing Schemes on One Dataset
compare_trees()
Compare Two context trees by Symmetric Divergence with Permutation Test
context_tree()
Fit a Prediction Suffix Tree from Categorical Sequence Data
divergent_pathways()
Most Predictively Divergent Pathways
engagement
Student engagement state sequences (stslist)
generate_sequences()
Sample Sequences from a Fitted Context Tree
group_regulation_long
Collaborative-regulation events (long format)
impute_sequences()
Impute Missing States in Sequences
logLik(<transitiontrees>)
Log-Likelihood of a context tree
mine_contexts()
Mine Contexts by Next-State Probability
mine_sequences()
Mine Sequences by Predictive Surprise
model_fit()
Model-Fit Scalars in One Call
n_nodes()
Number of Contexts (Nodes) in a Tree
nobs(<transitiontrees>)
Number of Observations Used to Fit a context tree
pathway_exists()
Test Whether a Pathway Exists in the Tree
perplexity()
Perplexity of a context tree
plot(<transitiontrees>)
Plot a Context Tree
plot(<transitiontrees_bootstrap>)
Plot a context tree Bootstrap
plot(<transitiontrees_comparison>)
Plot a context tree Comparison
plot(<transitiontrees_group>)
Plot Each Tree in a context tree Group
plot(<transitiontrees_group_comparison>)
Plot a Group Comparison
plot(<transitiontrees_tune>)
Plot a context tree CV Grid
plot_difference()
Difference (Subtraction) Map Between Two Groups
plot_distributions()
Per-Context Next-State Distributions
plot_divergence()
Lollipop Chart of Pathway Divergence
plot_pathway_resamples()
Plot Bootstrap Resample Distributions per Pathway
plot_pathways()
Plot Pathways as a Probability Heatmap
plot_predictive()
Predictive Diagnostics for Held-Out Scoring
plot_pruning()
Illustrate Pruning Along a Pathway's Suffix Chain
plot_trajectories()
Forward Trajectory Tree (Prefix Tree)
predict(<transitiontrees>)
Predict Next-State Probabilities from a Context Tree
prepare_input()
Reshape Long Event Data into a Wide Sequence Frame
print(<summary.transitiontrees>)
Print a Context-Tree Summary
print(<transitiontrees>)
Print a Context Tree
print(<transitiontrees_bootstrap>)
Print a context tree Bootstrap
print(<transitiontrees_comparison>)
Print a context tree Comparison
print(<transitiontrees_group>)
Print a Group of Context Trees
print(<transitiontrees_group_comparison>)
Print a Group Comparison
print(<transitiontrees_tune>)
Print a context tree Tuning Grid
prune_tree()
Prune a Context Tree
query_pathway()
Query the Probability of a Specific Pathway -> Next State
score_positions()
Per-Position Scoring
score_sequences()
Per-Sequence Scoring
sharp_pathways()
Sharpest Pathways
simulate(<transitiontrees>)
Simulate Sequences from a Fitted context tree
smooth_tree()
Re-Smooth a Fitted context tree
subtree()
Extract the Subtree Rooted at a Pathway
summary(<transitiontrees>)
Summary of a Context Tree
summary(<transitiontrees_bootstrap>)
Summarise a context tree Bootstrap
summary(<transitiontrees_group_comparison>)
Summarise a Group Comparison
trajectories
Student engagement trajectories
tree_dependence()
Per-Context Path Dependence of a Context Tree
tree_distance()
Symmetric KL Distance Between Two context trees
tree_pathways()
Pathways from a Fitted Tree
tune_tree()
Cross-Validated Hyperparameter Tuning for context trees