Per-Context Next-State Distributions — plot_distributions • transitiontrees

Small-multiples bar chart of the full next-state distribution P(next | context), one panel per context. A per-context probability display: where plot_pathways() renders the same numbers as a heatmap, this shows each context's distribution as its own panel, with the modal bar highlighted.

Usage

plot_distributions(tree, contexts = NULL, top = 12L, min_count = 1L)

Arguments

tree: A transitiontrees.
contexts: Character vector of pathway strings to show, or NULL (default) to take the top most frequent contexts.
top: Integer. Number of contexts to show when contexts is NULL. Default 12.
min_count: Integer. Drop contexts below this count. Default 1.

Value

A ggplot object.

Examples

# \donttest{
seqs <- replicate(60, sample(c("A", "B", "C"), 10, replace = TRUE),
                  simplify = FALSE)
tree <- context_tree(seqs, max_depth = 2L)
plot_distributions(tree, top = 9)

# }