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Report Network Pruning Details

Source: R/prune.R
net_pruning_details.Rd

Returns the edges removed by net_prune as a tidy one-row-per-edge data frame, with the method, cut-off, and retained/removed counts attached as attributes and shown by its print method.

Usage

net_pruning_details(x, ...)

# S3 method for class 'netobject'
net_pruning_details(x, ...)

# S3 method for class 'netobject_group'
net_pruning_details(x, ...)

# Default S3 method
net_pruning_details(x, ...)

Arguments

x

A pruned netobject or netobject_group.

...

Ignored.

Value

For a netobject: a net_pruning_details data frame (columns from, to, weight) of removed edges. For a netobject_group: a named list of such data frames.

See also

net_prune

Examples

seqs <- data.frame(
  V1 = c("A","B","A","C","B"), V2 = c("B","C","B","A","C"),
  V3 = c("C","A","C","B","A"))
net <- build_network(seqs, method = "relative")
net_pruning_details(net_prune(net, threshold = 0.2))
#> Pruning details
#>   Method:  user-specified threshold (0.2)
#>   Removed: 0 edges
#>   Retained: 3 edges
#> 
#> (no edges removed)