Plot an idiographic network result

S3 plot() methods that render any idiographic result with cograph::splot(). Call plot(fit) to draw the full result (every network panel) or pass layer to draw a single network – "temporal", "contemporaneous", "between" (mlVAR), or "residual_cov" (uSEM) – without indexing into the object.

Usage

# S3 method for class 'var_result'
plot(x, layer = NULL, mixed = FALSE, ...)

# S3 method for class 'gvar_result'
plot(x, layer = NULL, mixed = FALSE, ...)

# S3 method for class 'var_bayes_result'
plot(x, layer = NULL, mixed = FALSE, ...)

# S3 method for class 'net_mlvar'
plot(x, layer = NULL, mixed = FALSE, ...)

# S3 method for class 'net_usem'
plot(x, layer = NULL, mixed = FALSE, ...)

# S3 method for class 'net_gimme'
plot(x, layer = NULL, weight = c("prop", "coef"), ...)

# S3 method for class 'var_list'
plot(x, subject = 1L, layer = NULL, ...)

# S3 method for class 'gvar_list'
plot(x, subject = 1L, layer = NULL, ...)

# S3 method for class 'rolling_var_result'
plot(x, fit = 1L, layer = NULL, ...)

# S3 method for class 'rolling_gvar_result'
plot(x, fit = 1L, layer = NULL, ...)

# S3 method for class 'stability_result'
plot(x, layer = NULL, ...)

Arguments

x

An idiographic result (var_result, gvar_result, net_mlvar, net_usem, net_gimme, var_list, rolling_var_result, rolling_gvar_result, or stability_result).

layer

Optional network name to draw on its own. NULL (default) draws the whole result. Available names are reported if an unknown one is given.

mixed

If TRUE, draw two layers as a single mixed network via cograph::plot_mixed_network() — the directed layer as curved arrows and the undirected layer as straight edges. For VAR, graphical VAR, and multilevel VAR this combines the directed temporal network with the undirected contemporaneous network; for uSEM it combines the directed contemporaneous paths with the undirected residual covariances. Default FALSE draws one panel per layer.

...

Further arguments forwarded to cograph::splot().

weight

For GIMME: "prop" (proportion of subjects, default) or "coef" (group-average coefficient) for edge width.

subject

For a var_list / gvar_list: the subject name (or index) to draw. Defaults to the first subject.

fit

For rolling results: the stored window fit (name or index) to draw. Requires keep_fits = TRUE at fit time. Defaults to the first window.

Value

Invisibly, the object that was plotted (a cograph/ggplot object).

Examples

set.seed(1)
d <- data.frame(id = 1, A = rnorm(80), B = rnorm(80), C = rnorm(80))
fit <- fit_var(d, vars = c("A", "B", "C"), id = "id")
plot(fit)

plot(fit, layer = "temporal")