Tidy data frame of time-respecting paths
Usage
# S3 method for class 'dynet_paths'
as.data.frame(
x,
row.names = NULL,
optional = FALSE,
what = c("paths", "steps"),
...
)Arguments
- x
A
dynet_paths.- row.names
Ignored; present for compatibility with the generic.
- optional
Ignored; present for compatibility with the generic.
- what
"paths", the default, for the endpoint summary, or"steps"for the tidy reconstructed optimal routes. The latter includes endpoint-localpath_idvalues for tied contact sequences.- ...
Ignored.
Value
A plain data.frame. For "paths", one row per endpoint vertex,
the source included, with the columns paths() documents: node,
reachable, arrival_time, attained, latency, n_hops and
n_paths, plus path_session and n_best_sessions under
sessions = "bounded", and session and origin under
sessions = "separate". For "steps", one row per step of every
reconstructed optimal route, with endpoint (the vertex the route ends
at), path_id (which of the tied optimal routes to that endpoint),
path_session, step (position along the route, starting at the
source), node (the vertex occupied at that step), time (when it was
reached) and attained.
Examples
dn <- dynet(school_contacts)
reach <- paths(dn, from = "Ana")
as.data.frame(reach)
#> node reachable arrival_time attained latency n_hops n_paths
#> 1 Ana TRUE 0.00 TRUE 0.00 0 1
#> 2 Ben TRUE 9.59 TRUE 9.59 3 3
#> 3 Cara TRUE 6.67 TRUE 6.67 1 1
#> 4 Dan TRUE 7.98 TRUE 7.98 4 1
#> 5 Eve TRUE 11.66 TRUE 11.66 4 3
#> 6 Finn TRUE 6.96 TRUE 6.96 2 1
#> 7 Gita TRUE 6.36 TRUE 6.36 2 1
#> 8 Hugo TRUE 7.98 TRUE 7.98 3 1
#> 9 Iris TRUE 10.00 TRUE 10.00 3 1
#> 10 Jonas TRUE 2.12 TRUE 2.12 1 1
#> 11 Kira TRUE 6.12 TRUE 6.12 2 2
#> 12 Leo TRUE 9.65 TRUE 9.65 3 1
#> 13 Mira TRUE 6.36 TRUE 6.36 1 1
#> 14 Nils TRUE 7.51 TRUE 7.51 2 1
as.data.frame(reach, what = "steps")
#> endpoint path_id path_session step node time attained
#> 1 Ana 1 <NA> 0 Ana 0.00 TRUE
#> 2 Ben 1 <NA> 0 Ana 0.00 TRUE
#> 3 Ben 1 <NA> 1 Jonas 2.12 TRUE
#> 4 Ben 1 <NA> 2 Kira 6.12 TRUE
#> 5 Ben 1 <NA> 3 Ben 9.59 TRUE
#> 6 Ben 2 <NA> 0 Ana 0.00 TRUE
#> 7 Ben 2 <NA> 1 Jonas 3.43 TRUE
#> 8 Ben 2 <NA> 2 Kira 6.12 TRUE
#> 9 Ben 2 <NA> 3 Ben 9.59 TRUE
#> 10 Ben 3 <NA> 0 Ana 0.00 TRUE
#> 11 Ben 3 <NA> 1 Jonas 6.68 TRUE
#> 12 Ben 3 <NA> 2 Kira 6.68 TRUE
#> 13 Ben 3 <NA> 3 Ben 9.59 TRUE
#> 14 Cara 1 <NA> 0 Ana 0.00 TRUE
#> 15 Cara 1 <NA> 1 Cara 6.67 TRUE
#> 16 Dan 1 <NA> 0 Ana 0.00 TRUE
#> 17 Dan 1 <NA> 1 Cara 6.67 TRUE
#> 18 Dan 1 <NA> 2 Nils 7.51 TRUE
#> 19 Dan 1 <NA> 3 Hugo 7.98 TRUE
#> 20 Dan 1 <NA> 4 Dan 7.98 TRUE
#> 21 Eve 1 <NA> 0 Ana 0.00 TRUE
#> 22 Eve 1 <NA> 1 Jonas 2.12 TRUE
#> 23 Eve 1 <NA> 2 Kira 6.12 TRUE
#> 24 Eve 1 <NA> 3 Ben 9.59 TRUE
#> 25 Eve 1 <NA> 4 Eve 11.66 TRUE
#> 26 Eve 2 <NA> 0 Ana 0.00 TRUE
#> 27 Eve 2 <NA> 1 Jonas 3.43 TRUE
#> 28 Eve 2 <NA> 2 Kira 6.12 TRUE
#> 29 Eve 2 <NA> 3 Ben 9.59 TRUE
#> 30 Eve 2 <NA> 4 Eve 11.66 TRUE
#> 31 Eve 3 <NA> 0 Ana 0.00 TRUE
#> 32 Eve 3 <NA> 1 Jonas 6.68 TRUE
#> 33 Eve 3 <NA> 2 Kira 6.68 TRUE
#> 34 Eve 3 <NA> 3 Ben 9.59 TRUE
#> 35 Eve 3 <NA> 4 Eve 11.66 TRUE
#> 36 Finn 1 <NA> 0 Ana 0.00 TRUE
#> 37 Finn 1 <NA> 1 Cara 6.67 TRUE
#> 38 Finn 1 <NA> 2 Finn 6.96 TRUE
#> 39 Gita 1 <NA> 0 Ana 0.00 TRUE
#> 40 Gita 1 <NA> 1 Mira 6.36 TRUE
#> 41 Gita 1 <NA> 2 Gita 6.36 TRUE
#> 42 Hugo 1 <NA> 0 Ana 0.00 TRUE
#> 43 Hugo 1 <NA> 1 Cara 6.67 TRUE
#> 44 Hugo 1 <NA> 2 Nils 7.51 TRUE
#> 45 Hugo 1 <NA> 3 Hugo 7.98 TRUE
#> 46 Iris 1 <NA> 0 Ana 0.00 TRUE
#> 47 Iris 1 <NA> 1 Cara 6.67 TRUE
#> 48 Iris 1 <NA> 2 Finn 6.96 TRUE
#> 49 Iris 1 <NA> 3 Iris 10.00 TRUE
#> 50 Jonas 1 <NA> 0 Ana 0.00 TRUE
#> 51 Jonas 1 <NA> 1 Jonas 2.12 TRUE
#> 52 Kira 1 <NA> 0 Ana 0.00 TRUE
#> 53 Kira 1 <NA> 1 Jonas 2.12 TRUE
#> 54 Kira 1 <NA> 2 Kira 6.12 TRUE
#> 55 Kira 2 <NA> 0 Ana 0.00 TRUE
#> 56 Kira 2 <NA> 1 Jonas 3.43 TRUE
#> 57 Kira 2 <NA> 2 Kira 6.12 TRUE
#> 58 Leo 1 <NA> 0 Ana 0.00 TRUE
#> 59 Leo 1 <NA> 1 Cara 6.67 TRUE
#> 60 Leo 1 <NA> 2 Finn 6.96 TRUE
#> 61 Leo 1 <NA> 3 Leo 9.65 TRUE
#> 62 Mira 1 <NA> 0 Ana 0.00 TRUE
#> 63 Mira 1 <NA> 1 Mira 6.36 TRUE
#> 64 Nils 1 <NA> 0 Ana 0.00 TRUE
#> 65 Nils 1 <NA> 1 Cara 6.67 TRUE
#> 66 Nils 1 <NA> 2 Nils 7.51 TRUE